FastQCFastQC Report
Mon 23 Dec 2024
ENCFF641WPY.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameENCFF641WPY.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences48692928
Sequences flagged as poor quality0
Sequence length100
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTGATTATTGCCTATAGTCTGATTAACTAACAATGGTTATCCGAGTTGTT1590030.32654228556557535No Hit
GGAAGAAGGAGGGGGGAAGAGAGGTGGCGACGACGCGGGGGACGACGGGG1338160.2748160882828816No Hit
GGGGAAGAGAGGTGGCGACGACGCGGGGGACGACGGGGCCCCGCGGGGAA1077480.2212805933543368No Hit
CCGAGTTGTTATACGCGTATGCCTGGAGAATTGGAATTCTTGTTACTCAT1072750.22030919972608753No Hit
CGTTGATCAAAATATATCTGGGTCAATAAGATATGTTGATTTTACTTTGA1064380.21859026427821304No Hit
CTATAATCTAAACTTACTTTTTGATTTTGTTGTTTTTTTAGCAAGTTTAA938600.1927589977747898No Hit
CCCGAGTGTCCGGGCCCCCCGCCCCACCGGGGGCCCGCTGGTTCCTCCCG866140.1778779867170855No Hit
CCGGTGTTGGGTTAACAGAGAAGTTATAGGTGGATTATTTATAGTGTGAT809820.16631162537607105No Hit
GGGAAGAGAGGTGGCGACGACGCGGGGGACGACGGGGCCCCGCGGGGAAG768720.1578709746105225No Hit
CCAGGCTGGAGTGCAGTGGCTATTCACAGGCGCGATCCCACTACTGATCA688600.14141683983349698No Hit
TAACAGAGAAGTTATAGGTGGATTATTTATAGTGTGATTATTGCCTATAG658060.13514488181938863No Hit
GCTCAATTCAATTAAGCTCTCTATTCTTAATTTACTACTAAATCCTCCTT646080.13268456561084188No Hit
CTCTATTCTTAATTTACTACTAAATCCTCCTTAGTCCTTTAGTTTCATAA641380.13171933304154557No Hit
CTTTAGTTTCATAAAGGGTATAGTAATGTTCTTTTATAAGAAAATGTAGC639490.13133118632750942No Hit
GTAAATTATGGAATTAATTGAAATTTTATGTTGAGCTTGAACGCTTTCTT620720.12747641710927715No Hit
CTTTCCTTTAGGCATTCCGGTGTTGGGTTAACAGAGAAGTTATAGGTGGA618640.1270492503552056No Hit
ATTTTATTTAGATTTTATTCATAAATTAAGTTGAGAGCGCTTATTTGTAA614580.12621545371023898No Hit
GGCTAGGCAAGGTGTCTTAAGCTATTTTAATGTGCTTGATACCCTCTCCT611520.12558702569703756No Hit
GGGGTATCTAATCCCAGTTTGGGTCTTAGCTGTCGTGTATTATAAATGAC608590.12498529560596562No Hit
GGAGAATTGGAATTCTTGTTACTCATACTAACAGTGTTGCATCTATAAAG537890.110465733340168No Hit
CTCCTTAGTCCTTTAGTTTCATAAAGGGTATAGTAATGTTCTTTTATAAG508890.10451004301897802No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)