Proteomes in UniProt. EMBOSS

Task 1
Esherichia coli (K12)
Carnobacterium sp. CP1
ID
UP000000625
UP000064734
Count of aa-residues
1356178
715207
Protein count
4307
2388

WordCount for E.coli and Carnobacterium CP1

Task 2

Nitrogenous bases
Esherichia coli (K12) [%]
Carnobacterium sp. CP1 [%]
Difference
L 10,67241911 9,799820192 0,872598915
A 9,51416407 7,570954982 1,943209088
G 7,374695652 6,787964883 0,586730769
V 7,072891612 6,982034572 0,09085704
I 6,010125514 7,710355184 1,700229669
S 5,802335682 5,999661636 0,197325955
E 5,762149216 7,678755941 1,916606724
R 5,510928506 3,581340787 1,92958772
T 5,39870135 6,038112043 0,639410693
D 5,151314945 5,298186399 0,146871454
Q 4,439682697 3,85580678 0,583875916
P 4,426188893 3,417332325 1,008856568
K 4,406206265 6,895765841 2,489559576
N 3,945352306 4,52750043 0,582148124
F 3,891524564 4,398866342 0,507341778
Y 2,845201736 3,526671299 0,681469563
M 2,820057544 2,766891264 0,05316628
H 2,266590374 1,784098869 0,482491505
W 1,531141192 0,859751093 0,671390099
C 1,158107564 0,520129137 0,637978427
U 0,00022121 0,00022121

Excel for this tabke

The most frequent 3 aa-residues in E.coli's proteome: L,A,G: while for Carnobact.CP1 the most frequent are L, I and E.

The least frequent aa-residues are H, W, C (U is out of competition) for both organisms.

The biggest difference is between Ks in fawor of Carnobacterium. But the second difference is between As in favor of E.coli.

© Григорьева Маша