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Phylogenetic tree
Chosen bacteria
Name | Mnemonic |
Pseudomonas aeruginosa | PSEAE |
Yersinia pseudotuberculosis | YERPS |
Pasteurella multocida | PASMU |
Proteus mirabilis | PROMH |
Bradyrhizobium diazoefficiens | BRADU |
Burkholderia cenocepacia | BURCA |
Rhodobacter sphaeroides | RHOS4 |
Bracket tree formula
((BURCA,(PSEAE,(PASMU,(YERPS,PROMH)))),(BRADU,RHOS4)); |
Tree imagine
Phylogenetic tree of sample 7 bacteria.
Tree branches
There are 4 non-trivial branches:
{RHOS4,BRADU} vs {BURCA,DSEAE,PASMU,YERPS,BROMH}
{BURCA,BRADU,PHOS4} vs {PSEAE,PASMU,YERPS,PROMH}
{BURCA,PSEAE,BRADU,RHOS4} vs {PASMU,YERPS,PROMH}
{PASMU,PSEAE,BURCA,BRADU,RHOS4} vs {YERPS,PROMH} |
Taxonomy
Using NCBI taxonomy base I found taxnomy of the chosen bacteria (see the following table)
Name | Mnemonic | Taxonomy |
Pseudomonas aeruginosa | PSEAE | cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group |
Yersinia pseudotuberculosis | YERPS | cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Yersiniaceae; Yersinia; Yersinia pseudotuberculosis complex |
Pasteurella multocida | PASMU | cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Pasteurella |
Proteus mirabilis | PROMH | cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Morganellaceae; Proteus |
Bradyrhizobium diazoefficiens | BRADU | cellular organisms; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium |
Burkholderia cenocepacia | BURCA | cellular organisms; Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex |
Rhodobacter sphaeroides | RHOS4 | cellular organisms; Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter |
Tree branches
All organisms belong to Proteobacteria. Some non-trivial branches combine the taxonomic groups:
{RHOS4,BRADU} - Alphaproteobacteria
{YERPS,PROMH} - Enterobacterales |
© Darya Potanina, 2017
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