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Phylogenetic tree

Chosen bacteria

NameMnemonic
Pseudomonas aeruginosaPSEAE
Yersinia pseudotuberculosisYERPS
Pasteurella multocidaPASMU
Proteus mirabilisPROMH
Bradyrhizobium diazoefficiensBRADU
Burkholderia cenocepaciaBURCA
Rhodobacter sphaeroidesRHOS4

Bracket tree formula

((BURCA,(PSEAE,(PASMU,(YERPS,PROMH)))),(BRADU,RHOS4));

Tree imagine

Phylogenetic tree of sample 7 bacteria.

Tree branches

There are 4 non-trivial branches:

{RHOS4,BRADU} vs {BURCA,DSEAE,PASMU,YERPS,BROMH}
{BURCA,BRADU,PHOS4} vs {PSEAE,PASMU,YERPS,PROMH}
{BURCA,PSEAE,BRADU,RHOS4} vs {PASMU,YERPS,PROMH}
{PASMU,PSEAE,BURCA,BRADU,RHOS4} vs {YERPS,PROMH}

Taxonomy

Using NCBI taxonomy base I found taxnomy of the chosen bacteria (see the following table)

NameMnemonicTaxonomy
Pseudomonas aeruginosaPSEAEcellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas aeruginosa group
Yersinia pseudotuberculosisYERPScellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Yersiniaceae; Yersinia; Yersinia pseudotuberculosis complex
Pasteurella multocidaPASMUcellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Pasteurella
Proteus mirabilisPROMHcellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Morganellaceae; Proteus
Bradyrhizobium diazoefficiensBRADUcellular organisms; Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium
Burkholderia cenocepaciaBURCAcellular organisms; Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex
Rhodobacter sphaeroidesRHOS4cellular organisms; Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Rhodobacter

Tree branches

All organisms belong to Proteobacteria. Some non-trivial branches combine the taxonomic groups:
{RHOS4,BRADU} - Alphaproteobacteria
{YERPS,PROMH} - Enterobacterales

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© Darya Potanina, 2017